PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID cra_locus_15518_iso_1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Apocynaceae; Rauvolfioideae; Vinceae; Catharanthinae; Catharanthus
Family ERF
Protein Properties Length: 195aa    MW: 21671.3 Da    PI: 7.4998
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
cra_locus_15518_iso_1genomeMPGR-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.72.8e-182272155
                                  AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                                         ++ykGVr ++ +g+Wv+eIr p   ++++r++lg++ t+e Aa+a++aa  +l+g
  cra_locus_15518_iso_1_len_830_ver_3 22 KKYKGVRMRS-WGSWVSEIRAP---NQKTRIWLGSYSTPEAAARAYDAALICLKG 72
                                         59*****998.**********9...336***********************9987 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000182.74E-192284No hitNo description
Gene3DG3DSA:3.30.730.101.4E-282383IPR001471AP2/ERF domain
PROSITE profilePS5103221.3512382IPR001471AP2/ERF domain
PfamPF008472.3E-112372IPR001471AP2/ERF domain
SMARTSM003801.9E-332388IPR001471AP2/ERF domain
SuperFamilySSF541712.09E-182382IPR016177DNA-binding domain
PRINTSPR003671.2E-82435IPR001471AP2/ERF domain
PRINTSPR003671.2E-84662IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009751Biological Processresponse to salicylic acid
GO:0009753Biological Processresponse to jasmonic acid
GO:0034605Biological Processcellular response to heat
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0071497Biological Processcellular response to freezing
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 195 aa     Download sequence    Send to blast
MVKKTTTDQK KMQPKSVISN KKKYKGVRMR SWGSWVSEIR APNQKTRIWL GSYSTPEAAA  60
RAYDAALICL KGTSANANLN FPNNYSSSAV AAAETTINMS PKSIQRIAAA AAAAANGTDH  120
VFPAQPQPQP SSSSSSSSPI EDDLMISVPW YNFDSPKYRF MDHDETAAFF FDPLMNNNIE  180
DFVYEEELGD DIRLW
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00156DAPTransfer from AT1G21910Download
Motif logo
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010530195.13e-39PREDICTED: ethylene-responsive transcription factor ERF014-like
SwissprotQ9SFE44e-39ERF12_ARATH; Ethylene-responsive transcription factor ERF012
TrEMBLA0A103YCW02e-41A0A103YCW0_CYNCS; AP2/ERF domain-containing protein
STRINGAT1G21910.11e-36(Arabidopsis thaliana)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA61772435